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Technical training program (This is a 4-day training program)

  • Day 1 :

    A. Safety operation in a PCR lab: 

    • Hazardous chemicals.
    • Safety rules for machines operation.
    • Reagent preservation and lab security

    B. Basic theory of PCR:

    • DNA structure.
    • The function of DNA Polymerase.
    • The principle of polymerase chain reaction (PCR).
    • Basic requirements and design of PCR lab.
    • Potential problems of PCR.

    C. Introduction of PCR related reagents:

    • DNA extraction kit
    • IQ2000TM WSSV Kit.
    • Reagents for electrophoresis.

    D. Introduction of PCR related equipment

    E. Review of some major shrimp viral diseases:

    • White spot syndrome virus (WSSV).
    • Yellow-head virus/Gill-associated virus (YHV/GAV).
    • Infectious hypodermal and haematopoietic necrosis virus (IHHNV).
    • Taura syndrome virus (TSV).

    F. Basic theory of viral disease prevention:

    • Avoid vertical transmission.
    •  Avoid horizontal transmission.
  • Day 2:
  • A. Practice of DNA extraction

    B. Practice of PCR operation procedure:

    • Reaction condition.
    • Reagents preparation.
    • Reaction Procedure.

    C. Practice of gel electrophoresis:

    • Agarose gel preparation.
    • Electrophoresis.
    • Gel staining and data assay.

    D. Sampling procedure and sample preservation:

    • Preservation of shrimp (tissue) samples.
    • Preservation of DNA samples.
    • Introduction of sample dissecting tools.
    • Disinfection procedure of the sample dissecting tools.
    • Sampling strategy for broodstocks.
    • Sampling strategy for eggs and nauplii.
    • Sampling strategy for PLs.
    • Sampling strategy for juveniles in the grow-out pond.
    • Sampling strategy for environmental factors.
  • Day 3:
  • A. Perform the assay by using real samples:

    • To compare the sensitivity, reproducibility, and to practice more, it is necessary to go through the whole procedure by real samples again.
    • Positive standards and negative control are required.
    • Requirements of sample.

    B. Detail description of PCR diagnostic procedure:

    • Sampling, sensitivity, and statistical issue.
    • False positive or false negative result.
    • Reproducibility.
    • Lab management.

    C. How to integrate the diagnostic results into practical shrimp farming industry: 

    • Environmental screening.
    • Choosing the source of brooders and PLs.
    •  Viral risk management for the grow-out pond.
  • Day 4:
  • A. Real samples operation:  to confirm the operation and process the other diagnostic systems.

    B. Discussion.

 

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